CDS

Accession Number TCMCG024C13718
gbkey CDS
Protein Id XP_021986010.1
Location join(142175252..142175488,142177044..142177130,142177220..142177301,142177792..142177918,142178536..142178848)
Gene LOC110882231
GeneID 110882231
Organism Helianthus annuus

Protein

Length 281aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA396063
db_source XM_022130318.2
Definition splicing factor U2af small subunit B [Helianthus annuus]

EGGNOG-MAPPER Annotation

COG_category A
Description Zinc finger C-x8-C-x5-C-x3-H type (and similar)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12836        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
ko05131        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
map05131        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009648        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030628        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0036002        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048573        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0089701        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGAGCATTTAGCATCCATATTCGGAACCGAGAAGGACAGAGTCAACTGTCCGTTCTACTTCAAGATCGGAGCATGCCGCCATGGCGATCGATGCTCAAGGCTCCACACCAAACCTAGCATCAGCCCTACACTATTACTCTCCAATATGTACCAGCGTCCCGATATGATCACTCCTGGTGTTGATCCGCAAGGTCAGCCACTTGATCCGAGCAAAATACAGGATCACTTCGAGGACTTTTACGAAGATCTGTTTGAAGAGTTGGGAAAATACGGAGAGATTGAAAGCCTAAACATATGTGATAACTTGGCTGACCATATGGTAGGAAATGTGTACGCACAGTTTAGGGAAGAAGAACATGCTGCAGCTGCTCTCCAGAATCTGAGTGGAAGGTTTTATGCGGGTCGCCCCATTATTGTTGACTTTTCTCCAGTCACTGATTTTCGTGAAGCTACATGTAGACAATATGAAGAAAACGTATGCAATCGAGGTGGTTATTGCAACTTCATGCATCTGAAAAAGATTAACAAAGATTTGAGGAGACAGTTATTTGGGAGACGTAGGAGAAGTAGAAGCAGAAGCCGTAGTCCACCAAGGCACCGGAATCACGATGACCGCCCTTCAGGCGGCGGTCGTGGTGGCGGTGGTTACTCCGATCACCGCCACAGTGACAGAAGCAGGAGGCCTAGAAGTAGGAGCCCAGCAAGAAGATCTGGTCGGAGCAGAAGCCCGGACGGAAAGAGAAACCGCAGCCCAGTTAGAGAAGGCAGTGCTGAACGAAGGGCTAAGATTGAACAATGGAACCGAGAAAAAGAAGCAAAATCAGCTAATGCAACGGATTAA
Protein:  
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQPLDPSKIQDHFEDFYEDLFEELGKYGEIESLNICDNLADHMVGNVYAQFREEEHAAAALQNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKINKDLRRQLFGRRRRSRSRSRSPPRHRNHDDRPSGGGRGGGGYSDHRHSDRSRRPRSRSPARRSGRSRSPDGKRNRSPVREGSAERRAKIEQWNREKEAKSANATD